Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015915590.1_cds_XP_016465386.1_58342
CDS Infomation

[gene=LOC107788224] [db_xref=GeneID:107788224] [protein=pentatricopeptide repeat-containing protein At3g60050-like] [protein_id=XP_016465386.1] [location=complement(15933..17441)] [gbkey=CDS]
Sequence

ATGTATTCTGTAGCTCTTTTTGGTCAAAGAGTTATTCAGAGATTCTCATATTTTAGCAGC
TTTTCACGGTTTTTATGTAATCGACAATTTGACACTGATGGCACTGGAAATGGGTTTGGA
AAAATCGAAGATTACTTGAATGAGAGCTGGAAGAGTATGAACTCCGGTAATAATATGAAA
GATAAGCCTGATATACAGGAGTCGCCTGACTTTATTGGAATCAATGGCTGCTATGAAGGT
GATTTCCGACAAAATTTTAAAAGTCGGCACAACTTTATTGAGAAAGTGAGAAATGAGGCT
TGTATGATTCTTGAAATTCTTCAACAAGATGGTCCAGGATTTGATGCAAAAGAAGCTTTA
GATAATTCGCATATTACAGTTTCAAGCCTGCTTGTGAGAGAAGTTCTTCTAGGTATCTTG
AAAACAATAAATTATGCTAATAAAAATAGGTGTGCGAAGCTGGGGTACAAGTTCTTTGTA
TGGTCTGGTCAACAAGAAAATTACCGGCATACGGCCNACCGGCATACGGAAAATTCGTAC
CATCTGATAATGAAGATTTTTGCAGAGTCTGAGGAATTCAAGGCAATGTGGAGATTAGTA
GATGAGATGATTGAGAAAGGATACCCTACAACTGCTAGGACATTTAATTTGTTGATATGT
ACTTGTGGAGAGGCAGGTTTGGCTAGAAAAGTAGTAGAGAGGTTTATTAAGTCAAAGACA
TTCAATTATAGACCATTCAGGCATTCATTTAATGCAATTTTACATTCCCTTCTGGGTGTA
AATCAGTACAGGTTAATTGAGTGGGTGTATCAGCAAATGTTGGTTGAAGGTCATCTTCCT
GATATTTTAACTTATAACATACTGCTATGCTCGAAATATAGGCTGGGAAAGCTGGATCAA
TTTCATAGATTATTAGATGAAATGGGTCGGAATGGATTTTCACCCGATTTTCATACATTT
AACATCCTGCTTCATGTTCTTGGTAAAGGAGACAAACCGCTAGCAGTACTCAACCTTCTA
AACCACATGAAAGAAATTGGTTGTGAGCCAAGCATTCTGCATTTTACCACTTTGATAGAT
GGGCTAAGTCGGGCGGGTAATCTGGATGCATGCAAATACTTCTTTGAAGAGATGGTTAGG
CAGGGTTGTGTGCCTGATGTTGTGTGTTACACTGTTATGATAACAGGATATGTTGTGGCT
GGGGAACTTGATAAAGCTCAGGAACTATTTAGTGACATGATCGTCAATGGGCAGTTGCCA
AACGTGTTTACTTACAATGCCATGATTCGTGGGCTCTGTATGGCTGAGAAATTTGATGAG
GCATGCATGATGGTGAAAGAAATGGAATCGAGGGGTTGTAATCCAAATTTCATGGTGTAT
AGTACTTTAGTCAGTTACTTGAAAAAAGCTGGAAAGCTGTCCAAAGCTCATGAAGTAATT
AGACATATGGTGGAAAAAGGACAGTATATCCATCTCGTTCCAAAGTTCAAAAGATATAGA
AGATGTTAA

Peptide Sequence

PEP ID

XP_016465386.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At3g60050-like [Nicotiana tabacum]
Sequence

MYSVALFGQRVIQRFSYFSSFSRFLCNRQFDTDGTGNGFGKIEDYLNESWKSMNSGNNMK
DKPDIQESPDFIGINGCYEGDFRQNFKSRHNFIEKVRNEACMILEILQQDGPGFDAKEAL
DNSHITVSSLLVREVLLGILKTINYANKNRCAKLGYKFFVWSGQQENYRHTAXRHTENSY
HLIMKIFAESEEFKAMWRLVDEMIEKGYPTTARTFNLLICTCGEAGLARKVVERFIKSKT
FNYRPFRHSFNAILHSLLGVNQYRLIEWVYQQMLVEGHLPDILTYNILLCSKYRLGKLDQ
FHRLLDEMGRNGFSPDFHTFNILLHVLGKGDKPLAVLNLLNHMKEIGCEPSILHFTTLID
GLSRAGNLDACKYFFEEMVRQGCVPDVVCYTVMITGYVVAGELDKAQELFSDMIVNGQLP
NVFTYNAMIRGLCMAEKFDEACMMVKEMESRGCNPNFMVYSTLVSYLKKAGKLSKAHEVI
RHMVEKGQYIHLVPKFKRYRRC

Transcript Sequence

Gene sequence data has not been registered.